Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899502.1_cds_XP_016449473.1_44014
CDS Infomation

[gene=LOC107774460] [db_xref=GeneID:107774460] [protein=ferrochelatase-2, chloroplastic-like isoform X2] [protein_id=XP_016449473.1] [location=complement(join(105875..106190,107487..107587,108079..108231,108379..108505,108647..108750,111346..111447,111560..111703,111820..112153,112753..112835))] [gbkey=CDS]
Sequence

ATGGAAGCAGGGACGATCTCTCGGCTTCTTCAACCAATGAAGCAAAGTTCAAACCCTTCC
AATTTCAGCTCCAACTCTTCGATGTTCTGCCCTCGGACAAGGTTAATGCCTGCTTGCCAT
GTGTCACATGGTGGACGAGAAATGAATCCTACCGAGCAGGAATTATCTCTGGTTTTATCT
TCAGAAAATAAGAAGAGCAGTGTATTTGGTGGATTGTCTTTACATCGTCCAGTGCACAAG
AGAGATCCAGTCGGCAAAATGTTTTGTTCTGTCGGGGCGTATACATATCCCGGGAGCATT
GCTGAATCTCCTTCACAGACAACTGAAGAAAAGATTGGGGTGCTACTTTTGAATCTTGGA
GGACCAGACACGCTTCACGATGTTCAGCCTTTCTTGTTCAACTTATTTGCTGACCCTGAT
ATTATACGTCTCCCTAGATTATTCCGATTTCTCCAGCGCCCATTAGCACAACTCATTTCT
GTTCTCAGAGCCCCGAAGAGTAAGGAAGGGTACGCTGCAATTGGAGGCGGTTCCCCTTTA
CGAAAGATAACAGACGAGCAGGCTAGCGCGCTAAAAATGGCACTAGAAACAAAGGAAGTT
CCTGCAAATGTCTATGTTGCAATGCGATACTGGCACCCATTCACCGAGGAAGCTGTTCAC
CAGATAAAAAGAGATGGGATTACGAAGCTCGTAGTGCTGCCTTTGTATCCTCAATATTCT
ATCTCTACAACTGGTTCGAGCGTCCGTGCCTTACAGAATATTTTCAAGGATGACTCTTAT
CTGTCTAGACTGCCAGTTGCTATCATTGAATCCTGGTACCAACGACAAGGCTACATCAAG
TCCATGGCAGACTTGATTGAGAAGGAGTTGCATAATTTCTCCAACCCTGAGGAGGTCATG
ATTTTCTTTAGCGCCCATGGAGTGCCAGTTAGTTATGTTGAAGATGCTGGTGATCCGTAT
AGAGATCAGATGGAGGAGTGCATTTCCTTGATAATGAATGAGCTGAAAGCTAGAGGAACT
AACAATCATCATACCTTGGCTTATCAGAGCCGAGTTGGACCTGTACAGTGGTTGAAACCA
TACACTGACGAAGTTCTTGTTGAGCTTGGCAAGAAAGGTGTAAAGTCTCTGTTGGCTGTT
CCAGTAAGCTTTGTGAGTGAACACATAGAGACTCTTGAAGAGATTGATATGGAATACAAG
GAATTAGCACTTGAATCAGGAATTGAAAATTGGGGTCGTGTTCCTGCTCTGAATTGCACC
TCATCCTTCATAACTGATCTGGCAGATGCAGTTATTGAAGTATTGCCTTCGGCAATGGCA
ATGTCAACGTCCTCTGGCGCAGAGGAAGAAGTTGACAATGATCCAATGCAATATTTTATA
AAAATGCTTTTTGGATCACTATTAGCATTCGTTTTTCTGTTCTCACCAAAGATGGTATCG
GCTTTTAGGAAGAACATCCTTTAG

Peptide Sequence

PEP ID

XP_016449473.1
PEP Infomation

PREDICTED: ferrochelatase-2, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MEAGTISRLLQPMKQSSNPSNFSSNSSMFCPRTRLMPACHVSHGGREMNPTEQELSLVLS
SENKKSSVFGGLSLHRPVHKRDPVGKMFCSVGAYTYPGSIAESPSQTTEEKIGVLLLNLG
GPDTLHDVQPFLFNLFADPDIIRLPRLFRFLQRPLAQLISVLRAPKSKEGYAAIGGGSPL
RKITDEQASALKMALETKEVPANVYVAMRYWHPFTEEAVHQIKRDGITKLVVLPLYPQYS
ISTTGSSVRALQNIFKDDSYLSRLPVAIIESWYQRQGYIKSMADLIEKELHNFSNPEEVM
IFFSAHGVPVSYVEDAGDPYRDQMEECISLIMNELKARGTNNHHTLAYQSRVGPVQWLKP
YTDEVLVELGKKGVKSLLAVPVSFVSEHIETLEEIDMEYKELALESGIENWGRVPALNCT
SSFITDLADAVIEVLPSAMAMSTSSGAEEEVDNDPMQYFIKMLFGSLLAFVFLFSPKMVS
AFRKNIL

Transcript Sequence

Gene sequence data has not been registered.